BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D11SP1|AL426366
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1376 1601 0.0
>3x_Contig1376
Length = 7449
Score = 1601 bits (805), Expect = 0.0
Identities = 811/815 (99%)
Strand = Plus / Plus
Query: 1 accatagctgtttggtagttggtttttcttcttgcaaagtttctgtttgcaccaatttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3814 accatagctgtttggtagttggtttttcttcttgcaaagtttctgtttgcaccaatttga 3873
Query: 61 tactttggttgacagattccttgtcgttaatttcaatatgtccctctacagtatctcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3874 tactttggttgacagattccttgtcgttaatttcaatatgtccctctacagtatctcttc 3933
Query: 121 catcggcggtgtgggaagtttcaatttgggtttcatcatctccggcagtttcatcttcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3934 catcggcggtgtgggaagtttcaatttgggtttcatcatctccggcagtttcatcttcga 3993
Query: 181 atcttctaccttcgtagtaatcaatggttaaagattgtccagcaggtagaggtggaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3994 atcttctaccttcgtagtaatcaatggttaaagattgtccagcaggtagaggtggaatgt 4053
Query: 241 cgtcagtggacttgaagtagaaagttgggcctctgtmaatatcataccattttagggtcc 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4054 cgtcagtggacttgaagtagaaagttgggcctctgtaaatatcataccattttagggtcc 4113
Query: 301 agtctctgtgcaagattcttcttctgtagtatgggtacaagaagatgaagtaaacagcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4114 agtctctgtgcaagattcttcttctgtagtatgggtacaagaagatgaagtaaacagcac 4173
Query: 361 aagcgactagaccagtaagaacaatagccaatgcggtagttgtgccagacaatttatcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4174 aagcgactagaccagtaagaacaatagccaatgcggtagttgtgccagacaatttatcca 4233
Query: 421 acttcaagtttggagaacccttccaaacgatcaacatagtcaacaccgagaaggtagcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4234 acttcaagtttggagaacccttccaaacgatcaacatagtcaacaccgagaaggtagcga 4293
Query: 481 acaccaaamatccgacgagtagtaaagcgttcttaatagctttttcaattggcttaacat 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4294 acaccaaaaatccgacgagtagtaaagcgttcttaatagctttttcaattggcttaacat 4353
Query: 541 ccaagaccaggaacttggagatcaagasaatvatagtgaccaagcaaccggctaagattg 600
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 4354 ccaagaccaggaacttggagatcaagaaaataatagtgaccaagcaaccggctaagattg 4413
Query: 601 gagcaataaaccaagaagcaataatttgagaaacaccaccccaaccccattggacaccct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4414 gagcaataaaccaagaagcaataatttgagaaacaccaccccaaccccattggacaccct 4473
Query: 661 tggcaccaccggcagcaataccggcaccgatggtaccaccaacgatagaatgagtcgatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4474 tggcaccaccggcagcaataccggcaccgatggtaccaccaacgatagaatgagtcgatg 4533
Query: 721 acactggcataccaatagatgtcgcaattgaaagccaagtggcagaaccgacaagagcac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4534 acactggcataccaatagatgtcgcaattgaaagccaagtggcagaaccgacaagagcac 4593
Query: 781 atgccatagttaacattaacacagctggatcatct 815
|||||||||||||||||||||||||||||||||||
Sbjct: 4594 atgccatagttaacattaacacagctggatcatct 4628
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6027
Number of Sequences: 1807
Number of extensions: 6027
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)